WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y62H9A.10a.1 Sequence Name  Y62H9A.10a.1
Length (nt)  1121   Chromosome Location  X: 11901034-11902761
Chromosome . Primary Identifier  X Chromosome Location . Start  11901034
Chromosome Location . End  11902761 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y62H9A.10a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013398 Y62H9A.10 Y62H9A.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y62H9A.10a Y62H9A.10a 996   X: 11901147-11901326

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y62H9A.10a.1 11901034 11902761 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon254521   293   X: 11901034-11901326 Caenorhabditis elegans
Exon254523   113   X: 11901375-11901487 Caenorhabditis elegans
Exon254526   70   X: 11901533-11901602 Caenorhabditis elegans
Exon254527   102   X: 11901652-11901753 Caenorhabditis elegans
Exon254529   98   X: 11902023-11902120 Caenorhabditis elegans
Exon254531   109   X: 11902174-11902282 Caenorhabditis elegans
Exon254533   71   X: 11902329-11902399 Caenorhabditis elegans
Exon254535   168   X: 11902453-11902620 Caenorhabditis elegans
Exon254538   97   X: 11902665-11902761 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y62H9A.10a.1 11901034 11902761 -1

1 Sequence

Length
1121

1 Sequence Ontology Term

Identifier Name Description
transcript