WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

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mRNA :

WormMine ID  Transcript:F55G7.2.1 Sequence Name  F55G7.2.1
Length (nt)  1297   Chromosome Location  X: 11929767-11931659
Chromosome . Primary Identifier  X Chromosome Location . Start  11929767
Chromosome Location . End  11931659 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F55G7.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010120 dot-1.4 F55G7.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F55G7.2 F55G7.2 1152   X: 11929899-11930015

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F55G7.2.1 11929767 11931659 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon254591   249   X: 11929767-11930015 Caenorhabditis elegans
Exon254592   107   X: 11930069-11930175 Caenorhabditis elegans
Exon254593   254   X: 11930225-11930478 Caenorhabditis elegans
Exon254594   209   X: 11930823-11931031 Caenorhabditis elegans
Exon254595   150   X: 11931079-11931228 Caenorhabditis elegans
Exon254596   130   X: 11931281-11931410 Caenorhabditis elegans
Exon254597   198   X: 11931462-11931659 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F55G7.2.1 11929767 11931659 -1

1 Sequence

Length
1297

1 Sequence Ontology Term

Identifier Name Description
transcript