WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T19B4.7.1 Sequence Name  T19B4.7.1
Length (nt)  4840   Chromosome Location  I: 5679837-5691503
Chromosome . Primary Identifier  I Chromosome Location . Start  5679837
Chromosome Location . End  5691503 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T19B4.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006776 unc-40 T19B4.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T19B4.7 T19B4.7 4248   I: 5680366-5680479

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T19B4.7.1 5679837 5691503 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon13805   643   I: 5679837-5680479 Caenorhabditis elegans
Exon13806   471   I: 5680821-5681291 Caenorhabditis elegans
Exon13807   101   I: 5681347-5681447 Caenorhabditis elegans
Exon13808   90   I: 5682284-5682373 Caenorhabditis elegans
Exon13809   384   I: 5682423-5682806 Caenorhabditis elegans
Exon13810   968   I: 5682855-5683822 Caenorhabditis elegans
Exon13811   359   I: 5684265-5684623 Caenorhabditis elegans
Exon13812   164   I: 5684678-5684841 Caenorhabditis elegans
Exon13813   321   I: 5684891-5685211 Caenorhabditis elegans
Exon13814   110   I: 5685676-5685785 Caenorhabditis elegans
Exon13815   451   I: 5685877-5686327 Caenorhabditis elegans
Exon13816   141   I: 5686573-5686713 Caenorhabditis elegans
Exon13817   61   I: 5686981-5687041 Caenorhabditis elegans
Exon13818   229   I: 5687120-5687348 Caenorhabditis elegans
Exon13819   181   I: 5689420-5689600 Caenorhabditis elegans
Exon13820   84   I: 5691138-5691221 Caenorhabditis elegans
Exon13821   82   I: 5691422-5691503 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T19B4.7.1 5679837 5691503 -1

1 Sequence

Length
4840

1 Sequence Ontology Term

Identifier Name Description
transcript