WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C49F5.8.1 Sequence Name  C49F5.8.1
Length (nt)  960   Chromosome Location  X: 11960138-11961530
Chromosome . Primary Identifier  X Chromosome Location . Start  11960138
Chromosome Location . End  11961530 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C49F5.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008212 C49F5.8 C49F5.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C49F5.8 C49F5.8 405   X: 11960145-11960281

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C49F5.8.1 11960138 11961530 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon254638   144   X: 11960138-11960281 Caenorhabditis elegans
Exon254639   117   X: 11960326-11960442 Caenorhabditis elegans
Exon254640   85   X: 11960786-11960870 Caenorhabditis elegans
Exon254641   614   X: 11960917-11961530 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C49F5.8.1 11960138 11961530 1

1 Sequence

Length
960

1 Sequence Ontology Term

Identifier Name Description
transcript