WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C04F1.1.1 Sequence Name  C04F1.1.1
Length (nt)  1046   Chromosome Location  I: 5726308-5729310
Chromosome . Primary Identifier  I Chromosome Location . Start  5726308
Chromosome Location . End  5729310 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C04F1.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015442 C04F1.1 C04F1.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C04F1.1 C04F1.1 927   I: 5726384-5726548

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C04F1.1.1 5726308 5729310 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon13854   241   I: 5726308-5726548 Caenorhabditis elegans
Exon13855   123   I: 5727142-5727264 Caenorhabditis elegans
Exon13856   71   I: 5727311-5727381 Caenorhabditis elegans
Exon13857   151   I: 5727988-5728138 Caenorhabditis elegans
Exon13859   75   I: 5728487-5728561 Caenorhabditis elegans
Exon13860   120   I: 5728769-5728888 Caenorhabditis elegans
Exon13861   144   I: 5728938-5729081 Caenorhabditis elegans
Exon13862   121   I: 5729190-5729310 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C04F1.1.1 5726308 5729310 -1

1 Sequence

Length
1046

1 Sequence Ontology Term

Identifier Name Description
transcript