WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T22E7.2.1 Sequence Name  T22E7.2.1
Length (nt)  1292   Chromosome Location  I: 5764030-5768450
Chromosome . Primary Identifier  I Chromosome Location . Start  5764030
Chromosome Location . End  5768450 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T22E7.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020694 dhhc-11 T22E7.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T22E7.2 T22E7.2 951   I: 5764111-5764243

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T22E7.2.1 5764030 5768450 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon13939   214   I: 5764030-5764243 Caenorhabditis elegans
Exon13940   99   I: 5767000-5767098 Caenorhabditis elegans
Exon13941   184   I: 5767149-5767332 Caenorhabditis elegans
Exon13942   131   I: 5767470-5767600 Caenorhabditis elegans
Exon13943   105   I: 5767657-5767761 Caenorhabditis elegans
Exon13944   56   I: 5767816-5767871 Caenorhabditis elegans
Exon13945   503   I: 5767948-5768450 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T22E7.2.1 5764030 5768450 1

1 Sequence

Length
1292

1 Sequence Ontology Term

Identifier Name Description
transcript