WormMine: Gene WBGene00196331

• WormBase Gene ID: WBGene00196331
• Gene Name: B0198.4
• Sequence Name: B0198.4
• Organism: Caenorhabditis elegans
• Automated Description: Is affected by pgrn-1 based on RNA-seq studies.
• Biotype: SO:0001263
• Genetic Position: :±
• Length (nt): 135

1 Organism

• Name: Caenorhabditis elegans
• Taxon Id: 6239

1 Synonyms

• Value: WBGene00196331

Genomics

1 Transcripts

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
Transcript:B0198.4	B0198.4	135	X: 12025181-12025315

Other

0 CDSs

0 RNAi Result

8 Allele

• gk964260
• gk964029
• gk962707
• gk964028
• gk963810
• WBVar01602234
• tm11146
• gk887517

1 Chromosome

• WormBase ID: X
• Organism: Caenorhabditis elegans
• Length (nt): 17718942

1 Chromosome Location

• Feature . Primary Identifier: WBGene00196331
• Start: 12025181
• End: 12025315
• Strand: -1

2 Data Sets

• WormBaseAcedbConverter
• C. elegans genomic annotations (GFF3 Gene)

1 Downstream Intergenic Region

• WormBase ID: intergenic_region_chrX_12023664..12025180
• Length (nt): 1517
• Chromosome Location: X: 12023664-12025180
• Organism: Caenorhabditis elegans

1 Expression Clusters

Regulated By Treatment	Description	Algorithm	Primary Identifier
	Genes differentially expressed in pgrn-1(tm985), ced-3(n717) and ced-1(e1735) as compared to N2E.	Differential expression analysis was performed using the EdgeR Bioconductor package (19910308), and differentially expressed genes were selected based on False Discovery Rate (FDR Benjamini Hochberg adjusted p-values) estimated at <=5%.	WBPaper00044246:pgrn-1_ced-3_ced-1_downregulated

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations

• Feature . Primary Identifier: WBGene00196331
• Start: 12025181
• End: 12025315
• Strand: -1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

• Length: 135

1 Sequence Ontology Term