WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:B0198.1 Sequence Name  B0198.1
Length (nt)  840   Chromosome Location  X: 12032153-12032341
Chromosome . Primary Identifier  X Chromosome Location . Start  12032153
Chromosome Location . End  12032341
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0198.1

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE26461 TSP-20 32.1 279 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00038698
WBRNAi00009574

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:B0198.1 12032153 12032341 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006646 tsp-20 B0198.1 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:B0198.1 12032153 12032341 -1
CDS:B0198.1 12032431 12032535 -1
CDS:B0198.1 12033016 12033267 -1
CDS:B0198.1 12033314 12033499 -1
CDS:B0198.1 12033916 12034023 -1

1 Sequence

Length
840

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:B0198.1.1 B0198.1.1 1415   X: 12031592-12034037