WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F33D11.3.1 Sequence Name  F33D11.3.1
Length (nt)  936   Chromosome Location  I: 5842709-5844050
Chromosome . Primary Identifier  I Chromosome Location . Start  5842709
Chromosome Location . End  5844050 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F33D11.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000631 col-54 F33D11.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F33D11.3 F33D11.3 846   I: 5842714-5842857

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F33D11.3.1 5842709 5844050 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon14161   149   I: 5842709-5842857 Caenorhabditis elegans
Exon14162   160   I: 5842904-5843063 Caenorhabditis elegans
Exon14165   627   I: 5843424-5844050 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F33D11.3.1 5842709 5844050 1

1 Sequence

Length
936

1 Sequence Ontology Term

Identifier Name Description
transcript