WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F33D11.9c.1 Sequence Name  F33D11.9c.1
Length (nt)  2065   Chromosome Location  I: 5857547-5862557
Chromosome . Primary Identifier  I Chromosome Location . Start  5857547
Chromosome Location . End  5862557 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F33D11.9c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018006 gpaa-1 F33D11.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F33D11.9c F33D11.9c 1872   I: 5857740-5858124

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F33D11.9c.1 5857547 5862557 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon14206   578   I: 5857547-5858124 Caenorhabditis elegans
Exon14236   345   I: 5859276-5859620 Caenorhabditis elegans
Exon14243   116   I: 5859918-5860033 Caenorhabditis elegans
Exon14251   111   I: 5860627-5860737 Caenorhabditis elegans
Exon14258   613   I: 5861182-5861794 Caenorhabditis elegans
Exon14263   99   I: 5862208-5862306 Caenorhabditis elegans
Exon14271   203   I: 5862355-5862557 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F33D11.9c.1 5857547 5862557 -1

1 Sequence

Length
2065

1 Sequence Ontology Term

Identifier Name Description
transcript