WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00269422 Gene Name  T01H10.11
Sequence Name  ? T01H10.11 Organism  Caenorhabditis elegans
Automated Description  Enriched in I2L based on single-cell RNA-seq studies. Biotype  SO:0001217
Genetic Position  Length (nt)  ? 465
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00269422

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T01H10.11.1 T01H10.11.1 279   X: 12123452-12123916
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T01H10.11 T01H10.11 279   X: 12123452-12123509

2 RNAi Result

WormBase ID
WBRNAi00017998
WBRNAi00066368

14 Allele

Public Name
gk964260
gk964029
gk962707
gk964028
gk963810
gk964105
gk964104
WBVar00083451
WBVar01571257
gk295694
WBVar01571256
gk561562
tm10992
gk789417

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
WBGene00269422 12123452 12123916 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

0 Downstream Intergenic Region

2 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Genome-wide analysis of developmental and sex-regulated gene expression profile. self-organizing map cgc4489_group_2
  Single-cell RNA-Seq cell group 58_0 expressed in neuron. scVI 0.6.0 WBPaper00065841:58_0

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier
Start End Strand
WBGene00269422 12123452 12123916 1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
465

1 Sequence Ontology Term