WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T01H10.7.1 Sequence Name  T01H10.7.1
Length (nt)  1200   Chromosome Location  X: 12125608-12128000
Chromosome . Primary Identifier  X Chromosome Location . Start  12125608
Chromosome Location . End  12128000 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T01H10.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011360 lgc-18 T01H10.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T01H10.7 T01H10.7 1200   X: 12125608-12125677

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T01H10.7.1 12125608 12128000 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon254996   70   X: 12125608-12125677 Caenorhabditis elegans
Exon254997   96   X: 12125732-12125827 Caenorhabditis elegans
Exon254998   137   X: 12125874-12126010 Caenorhabditis elegans
Exon255000   110   X: 12126056-12126165 Caenorhabditis elegans
Exon255001   244   X: 12126210-12126453 Caenorhabditis elegans
Exon255002   213   X: 12127331-12127543 Caenorhabditis elegans
Exon255003   212   X: 12127628-12127839 Caenorhabditis elegans
Exon255004   118   X: 12127883-12128000 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T01H10.7.1 12125608 12128000 1

1 Sequence

Length
1200

1 Sequence Ontology Term

Identifier Name Description
transcript