WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:M153.1.1 Sequence Name  M153.1.1
Length (nt)  1001   Chromosome Location  X: 12146832-12148771
Chromosome . Primary Identifier  X Chromosome Location . Start  12146832
Chromosome Location . End  12148771 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M153.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010924 pycr-1 M153.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M153.1 M153.1 882   X: 12146845-12146911

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:M153.1.1 12146832 12148771 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon255053   80   X: 12146832-12146911 Caenorhabditis elegans
Exon255054   251   X: 12147273-12147523 Caenorhabditis elegans
Exon255055   213   X: 12147573-12147785 Caenorhabditis elegans
Exon255056   213   X: 12147837-12148049 Caenorhabditis elegans
Exon255057   92   X: 12148155-12148246 Caenorhabditis elegans
Exon255058   152   X: 12148620-12148771 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:M153.1.1 12146832 12148771 1

1 Sequence

Length
1001

1 Sequence Ontology Term

Identifier Name Description
transcript