WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F57G12.2a.1 Sequence Name  F57G12.2a.1
Length (nt)  711   Chromosome Location  X: 12157440-12160039
Chromosome . Primary Identifier  X Chromosome Location . Start  12157440
Chromosome Location . End  12160039 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F57G12.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010222 F57G12.2 F57G12.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F57G12.2a F57G12.2a 648   X: 12157503-12157583

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F57G12.2a.1 12157440 12160039 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon255075   144   X: 12157440-12157583 Caenorhabditis elegans
Exon255077   197   X: 12157629-12157825 Caenorhabditis elegans
Exon255079   82   X: 12157914-12157995 Caenorhabditis elegans
Exon255081   115   X: 12158051-12158165 Caenorhabditis elegans
Exon255083   173   X: 12159867-12160039 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F57G12.2a.1 12157440 12160039 -1

1 Sequence

Length
711

1 Sequence Ontology Term

Identifier Name Description
transcript