WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C34G6.2.1 Sequence Name  C34G6.2.1
Length (nt)  2355   Chromosome Location  I: 5898303-5902115
Chromosome . Primary Identifier  I Chromosome Location . Start  5898303
Chromosome Location . End  5902115 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C34G6.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016419 tyr-4 C34G6.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C34G6.2 C34G6.2 2256   I: 5898321-5898458

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C34G6.2.1 5898303 5902115 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon14396   156   I: 5898303-5898458 Caenorhabditis elegans
Exon14397   130   I: 5898939-5899068 Caenorhabditis elegans
Exon14398   131   I: 5899203-5899333 Caenorhabditis elegans
Exon14399   212   I: 5899378-5899589 Caenorhabditis elegans
Exon14400   462   I: 5899667-5900128 Caenorhabditis elegans
Exon14401   93   I: 5900175-5900267 Caenorhabditis elegans
Exon14402   335   I: 5900525-5900859 Caenorhabditis elegans
Exon14403   330   I: 5901227-5901556 Caenorhabditis elegans
Exon14404   506   I: 5901610-5902115 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C34G6.2.1 5898303 5902115 1

1 Sequence

Length
2355

1 Sequence Ontology Term

Identifier Name Description
transcript