WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:E01G6.3.1 Sequence Name  E01G6.3.1
Length (nt)  2036   Chromosome Location  X: 12241646-12244657
Chromosome . Primary Identifier  X Chromosome Location . Start  12241646
Chromosome Location . End  12244657 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
E01G6.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008451 cest-3 E01G6.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:E01G6.3 E01G6.3 1767   X: 12241733-12241864

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:E01G6.3.1 12241646 12244657 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon255188   219   X: 12241646-12241864 Caenorhabditis elegans
Exon255189   201   X: 12241909-12242109 Caenorhabditis elegans
Exon255190   109   X: 12242178-12242286 Caenorhabditis elegans
Exon255191   96   X: 12242463-12242558 Caenorhabditis elegans
Exon255192   124   X: 12242606-12242729 Caenorhabditis elegans
Exon255193   118   X: 12242980-12243097 Caenorhabditis elegans
Exon255194   189   X: 12243144-12243332 Caenorhabditis elegans
Exon255195   151   X: 12243380-12243530 Caenorhabditis elegans
Exon255196   106   X: 12243582-12243687 Caenorhabditis elegans
Exon255197   146   X: 12243732-12243877 Caenorhabditis elegans
Exon255198   158   X: 12244003-12244160 Caenorhabditis elegans
Exon255199   419   X: 12244239-12244657 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:E01G6.3.1 12241646 12244657 1

1 Sequence

Length
2036

1 Sequence Ontology Term

Identifier Name Description
transcript