WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C04B4.1.1 Sequence Name  C04B4.1.1
Length (nt)  1550   Chromosome Location  X: 12280777-12282559
Chromosome . Primary Identifier  X Chromosome Location . Start  12280777
Chromosome Location . End  12282559 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C04B4.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007289 C04B4.1 C04B4.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C04B4.1 C04B4.1 1476   X: 12280785-12280863

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C04B4.1.1 12280777 12282559 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon255247   87   X: 12280777-12280863 Caenorhabditis elegans
Exon255248   215   X: 12280912-12281126 Caenorhabditis elegans
Exon255249   275   X: 12281178-12281452 Caenorhabditis elegans
Exon255250   136   X: 12281500-12281635 Caenorhabditis elegans
Exon255251   664   X: 12281680-12282343 Caenorhabditis elegans
Exon255252   173   X: 12282387-12282559 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C04B4.1.1 12280777 12282559 1

1 Sequence

Length
1550

1 Sequence Ontology Term

Identifier Name Description
transcript