WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F17A2.1b.1 Sequence Name  F17A2.1b.1
Length (nt)  1263   Chromosome Location  X: 12315905-12317673
Chromosome . Primary Identifier  X Chromosome Location . Start  12315905
Chromosome Location . End  12317673 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F17A2.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006966 xtr-2 F17A2.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F17A2.1b F17A2.1b 1263   X: 12315905-12315955

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F17A2.1b.1 12315905 12317673 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon255311   51   X: 12315905-12315955 Caenorhabditis elegans
Exon255313   366   X: 12316215-12316580 Caenorhabditis elegans
Exon255315   103   X: 12316628-12316730 Caenorhabditis elegans
Exon255316   743   X: 12316931-12317673 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F17A2.1b.1 12315905 12317673 1

1 Sequence

Length
1263

1 Sequence Ontology Term

Identifier Name Description
transcript