WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F17A2.5 Sequence Name  F17A2.5
Length (nt)  990   Chromosome Location  X: 12318240-12318287
Chromosome . Primary Identifier  X Chromosome Location . Start  12318240
Chromosome Location . End  12318287
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F17A2.5

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE03215 CEH-40 38.2 329 Caenorhabditis elegans
 

Other

25 RNAi

WormBase ID
WBRNAi00044850
WBRNAi00013444
WBRNAi00031056
WBRNAi00086882
WBRNAi00086885
WBRNAi00086886
WBRNAi00086888
WBRNAi00069500
WBRNAi00069499
WBRNAi00069502
WBRNAi00069501
WBRNAi00069504
WBRNAi00069503
WBRNAi00069506
WBRNAi00069505
WBRNAi00069508
WBRNAi00069507
WBRNAi00069510
WBRNAi00069509
WBRNAi00093998
WBRNAi00069512
WBRNAi00107261
WBRNAi00069511
WBRNAi00069514
WBRNAi00069513

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F17A2.5 12318240 12318287 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000461 ceh-40 F17A2.5 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:F17A2.5 12318240 12318287 -1
CDS:F17A2.5 12318524 12318766 -1
CDS:F17A2.5 12319245 12319496 -1
CDS:F17A2.5 12319542 12319616 -1
CDS:F17A2.5 12319660 12319939 -1
CDS:F17A2.5 12320609 12320700 -1

1 Sequence

Length
990

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F17A2.5.1 F17A2.5.1 1181   X: 12318126-12320777