WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F17A2.8.1 Sequence Name  F17A2.8.1
Length (nt)  954   Chromosome Location  X: 12338440-12340248
Chromosome . Primary Identifier  X Chromosome Location . Start  12338440
Chromosome Location . End  12340248 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F17A2.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005122 srd-44 F17A2.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F17A2.8 F17A2.8 954   X: 12338440-12338724

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F17A2.8.1 12338440 12340248 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon255365   285   X: 12338440-12338724 Caenorhabditis elegans
Exon255366   138   X: 12338770-12338907 Caenorhabditis elegans
Exon255367   197   X: 12338993-12339189 Caenorhabditis elegans
Exon255368   67   X: 12339820-12339886 Caenorhabditis elegans
Exon255369   79   X: 12339933-12340011 Caenorhabditis elegans
Exon255370   188   X: 12340061-12340248 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F17A2.8.1 12338440 12340248 1

1 Sequence

Length
954

1 Sequence Ontology Term

Identifier Name Description
transcript