WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F42F12.3.1 Sequence Name  F42F12.3.1
Length (nt)  938   Chromosome Location  X: 12350578-12351788
Chromosome . Primary Identifier  X Chromosome Location . Start  12350578
Chromosome Location . End  12351788 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F42F12.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009635 srdf-2.2 F42F12.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F42F12.3 F42F12.3 732   X: 12350588-12350841

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F42F12.3.1 12350578 12351788 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon255388   264   X: 12350578-12350841 Caenorhabditis elegans
Exon255389   158   X: 12350891-12351048 Caenorhabditis elegans
Exon255390   253   X: 12351187-12351439 Caenorhabditis elegans
Exon255391   263   X: 12351526-12351788 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F42F12.3.1 12350578 12351788 1

1 Sequence

Length
938

1 Sequence Ontology Term

Identifier Name Description
transcript