WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F42F12.4.1 Sequence Name  F42F12.4.1
Length (nt)  608   Chromosome Location  X: 12351995-12352947
Chromosome . Primary Identifier  X Chromosome Location . Start  12351995
Chromosome Location . End  12352947 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F42F12.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009636 F42F12.4 F42F12.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F42F12.4 F42F12.4 537   X: 12352064-12352183

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F42F12.4.1 12351995 12352947 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon255392   189   X: 12351995-12352183 Caenorhabditis elegans
Exon255393   87   X: 12352241-12352327 Caenorhabditis elegans
Exon255394   93   X: 12352526-12352618 Caenorhabditis elegans
Exon255395   120   X: 12352667-12352786 Caenorhabditis elegans
Exon255396   119   X: 12352829-12352947 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F42F12.4.1 12351995 12352947 -1

1 Sequence

Length
608

1 Sequence Ontology Term

Identifier Name Description
transcript