WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F19H6.1.2 Sequence Name  F19H6.1.2
Length (nt)  1088   Chromosome Location  X: 12389594-12391480
Chromosome . Primary Identifier  X Chromosome Location . Start  12389594
Chromosome Location . End  12391480 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F19H6.1.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008956 nekl-3 F19H6.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F19H6.1 F19H6.1 909   X: 12389795-12389866

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F19H6.1.2 12389594 12391480 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon255433   8   X: 12389594-12389601 Caenorhabditis elegans
Exon255434   235   X: 12389632-12389866 Caenorhabditis elegans
Exon255437   72   X: 12389920-12389991 Caenorhabditis elegans
Exon255439   189   X: 12390080-12390268 Caenorhabditis elegans
Exon255441   128   X: 12390718-12390845 Caenorhabditis elegans
Exon255443   109   X: 12390891-12390999 Caenorhabditis elegans
Exon255445   85   X: 12391042-12391126 Caenorhabditis elegans
Exon255447   89   X: 12391174-12391262 Caenorhabditis elegans
Exon255449   173   X: 12391308-12391480 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F19H6.1.2 12389594 12391480 -1

1 Sequence

Length
1088

1 Sequence Ontology Term

Identifier Name Description
transcript