WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F17E5.1b.1 Sequence Name  F17E5.1b.1
Length (nt)  2333   Chromosome Location  X: 12399518-12405861
Chromosome . Primary Identifier  X Chromosome Location . Start  12399518
Chromosome Location . End  12405861 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F17E5.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002991 lin-2 F17E5.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F17E5.1b F17E5.1b 1863   X: 12399988-12400167

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F17E5.1b.1 12399518 12405861 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon255477   650   X: 12399518-12400167 Caenorhabditis elegans
Exon255479   161   X: 12400875-12401035 Caenorhabditis elegans
Exon255481   123   X: 12401083-12401205 Caenorhabditis elegans
Exon255483   127   X: 12401263-12401389 Caenorhabditis elegans
Exon255485   104   X: 12401434-12401537 Caenorhabditis elegans
Exon255487   108   X: 12401587-12401694 Caenorhabditis elegans
Exon255489   79   X: 12401816-12401894 Caenorhabditis elegans
Exon255491   254   X: 12401952-12402205 Caenorhabditis elegans
Exon255493   162   X: 12402301-12402462 Caenorhabditis elegans
Exon255495   115   X: 12402611-12402725 Caenorhabditis elegans
Exon255497   87   X: 12402774-12402860 Caenorhabditis elegans
Exon255499   84   X: 12404276-12404359 Caenorhabditis elegans
Exon255501   75   X: 12405250-12405324 Caenorhabditis elegans
Exon255502   204   X: 12405658-12405861 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F17E5.1b.1 12399518 12405861 -1

1 Sequence

Length
2333

1 Sequence Ontology Term

Identifier Name Description
transcript