WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F17E5.1a Sequence Name  F17E5.1a
Length (nt)  2886   Chromosome Location  X: 12399988-12400167
Chromosome . Primary Identifier  X Chromosome Location . Start  12399988
Chromosome Location . End  12400167
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F17E5.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE27131 LIN-2, isoform a 108.8 961 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00000540
WBRNAi00044888
WBRNAi00013468
WBRNAi00076312
WBRNAi00030265

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F17E5.1a 12399988 12400167 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002991 lin-2 F17E5.1 Caenorhabditis elegans

24 Locations


Feature . Primary Identifier
Start End Strand
CDS:F17E5.1a 12399988 12400167 -1
CDS:F17E5.1a 12400875 12401035 -1
CDS:F17E5.1a 12401083 12401205 -1
CDS:F17E5.1a 12401263 12401389 -1
CDS:F17E5.1a 12401434 12401537 -1
CDS:F17E5.1a 12401587 12401694 -1
CDS:F17E5.1a 12401816 12401894 -1
CDS:F17E5.1a 12401952 12402205 -1
CDS:F17E5.1a 12402301 12402462 -1
CDS:F17E5.1a 12402611 12402725 -1
CDS:F17E5.1a 12402774 12402860 -1
CDS:F17E5.1a 12404276 12404359 -1
CDS:F17E5.1a 12405250 12405324 -1
CDS:F17E5.1a 12407844 12407957 -1
CDS:F17E5.1a 12409093 12409178 -1
CDS:F17E5.1a 12409280 12409376 -1
CDS:F17E5.1a 12409991 12410098 -1
CDS:F17E5.1a 12410492 12410587 -1
CDS:F17E5.1a 12411063 12411238 -1
CDS:F17E5.1a 12411287 12411369 -1
CDS:F17E5.1a 12411417 12411512 -1
CDS:F17E5.1a 12412802 12412985 -1
CDS:F17E5.1a 12413788 12413900 -1
CDS:F17E5.1a 12413952 12414025 -1

1 Sequence

Length
2886

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F17E5.1a.1 F17E5.1a.1 3373   X: 12399517-12414041