WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F17E5.1b.1 Sequence Name  F17E5.1b.1
Length (nt)  2333   Chromosome Location  X: 12399518-12405861
Chromosome . Primary Identifier  X Chromosome Location . Start  12399518
Chromosome Location . End  12405861 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F17E5.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002991 lin-2 F17E5.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F17E5.1b F17E5.1b 1863   X: 12399988-12400167

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F17E5.1b.1 12399518 12405861 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon255504   650   X: 12399518-12400167 Caenorhabditis elegans
Exon255506   161   X: 12400875-12401035 Caenorhabditis elegans
Exon255508   123   X: 12401083-12401205 Caenorhabditis elegans
Exon255510   127   X: 12401263-12401389 Caenorhabditis elegans
Exon255512   104   X: 12401434-12401537 Caenorhabditis elegans
Exon255514   108   X: 12401587-12401694 Caenorhabditis elegans
Exon255516   79   X: 12401816-12401894 Caenorhabditis elegans
Exon255518   254   X: 12401952-12402205 Caenorhabditis elegans
Exon255520   162   X: 12402301-12402462 Caenorhabditis elegans
Exon255522   115   X: 12402611-12402725 Caenorhabditis elegans
Exon255524   87   X: 12402774-12402860 Caenorhabditis elegans
Exon255526   84   X: 12404276-12404359 Caenorhabditis elegans
Exon255528   75   X: 12405250-12405324 Caenorhabditis elegans
Exon255529   204   X: 12405658-12405861 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F17E5.1b.1 12399518 12405861 -1

1 Sequence

Length
2333

1 Sequence Ontology Term

Identifier Name Description
transcript