WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T18D3.1.1 Sequence Name  T18D3.1.1
Length (nt)  1904   Chromosome Location  X: 12454745-12457949
Chromosome . Primary Identifier  X Chromosome Location . Start  12454745
Chromosome Location . End  12457949 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T18D3.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011820 T18D3.1 T18D3.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T18D3.1 T18D3.1 1572   X: 12454765-12454954

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T18D3.1.1 12454745 12457949 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon255558   210   X: 12454745-12454954 Caenorhabditis elegans
Exon255559   272   X: 12455003-12455274 Caenorhabditis elegans
Exon255560   305   X: 12455929-12456233 Caenorhabditis elegans
Exon255561   100   X: 12456289-12456388 Caenorhabditis elegans
Exon255562   161   X: 12456443-12456603 Caenorhabditis elegans
Exon255563   856   X: 12457094-12457949 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T18D3.1.1 12454745 12457949 1

1 Sequence

Length
1904

1 Sequence Ontology Term

Identifier Name Description
transcript