WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK484.2a.2 Sequence Name  ZK484.2a.2
Length (nt)  2639   Chromosome Location  I: 6081782-6086006
Chromosome . Primary Identifier  I Chromosome Location . Start  6081782
Chromosome Location . End  6086006 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK484.2a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001819 haf-9 ZK484.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK484.2a ZK484.2a 2448   I: 6081816-6081920

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK484.2a.2 6081782 6086006 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon14953   11   I: 6081782-6081792 Caenorhabditis elegans
Exon14954   111   I: 6081810-6081920 Caenorhabditis elegans
Exon14958   78   I: 6081964-6082041 Caenorhabditis elegans
Exon14961   95   I: 6082088-6082182 Caenorhabditis elegans
Exon14964   374   I: 6082328-6082701 Caenorhabditis elegans
Exon14969   118   I: 6082988-6083105 Caenorhabditis elegans
Exon14972   131   I: 6083148-6083278 Caenorhabditis elegans
Exon14975   79   I: 6083346-6083424 Caenorhabditis elegans
Exon14978   127   I: 6083467-6083593 Caenorhabditis elegans
Exon14981   116   I: 6083790-6083905 Caenorhabditis elegans
Exon14984   82   I: 6083956-6084037 Caenorhabditis elegans
Exon14987   129   I: 6084087-6084215 Caenorhabditis elegans
Exon14990   332   I: 6084262-6084593 Caenorhabditis elegans
Exon14993   224   I: 6084765-6084988 Caenorhabditis elegans
Exon14996   107   I: 6085040-6085146 Caenorhabditis elegans
Exon14998   105   I: 6085191-6085295 Caenorhabditis elegans
Exon15000   420   I: 6085587-6086006 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK484.2a.2 6081782 6086006 1

1 Sequence

Length
2639

1 Sequence Ontology Term

Identifier Name Description
transcript