WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T18D3.4.1 Sequence Name  T18D3.4.1
Length (nt)  6334   Chromosome Location  X: 12468061-12475348
Chromosome . Primary Identifier  X Chromosome Location . Start  12468061
Chromosome Location . End  12475348 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T18D3.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003514 myo-2 T18D3.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T18D3.4 T18D3.4 5844   X: 12468149-12468211

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T18D3.4.1 12468061 12475348 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon255615   151   X: 12468061-12468211 Caenorhabditis elegans
Exon255616   129   X: 12468322-12468450 Caenorhabditis elegans
Exon255617   141   X: 12468507-12468647 Caenorhabditis elegans
Exon255618   475   X: 12468697-12469171 Caenorhabditis elegans
Exon255619   182   X: 12469227-12469408 Caenorhabditis elegans
Exon255620   160   X: 12469457-12469616 Caenorhabditis elegans
Exon255621   1292   X: 12469877-12471168 Caenorhabditis elegans
Exon255622   2537   X: 12471221-12473757 Caenorhabditis elegans
Exon255623   151   X: 12473804-12473954 Caenorhabditis elegans
Exon255624   291   X: 12474002-12474292 Caenorhabditis elegans
Exon255625   282   X: 12474478-12474759 Caenorhabditis elegans
Exon255626   543   X: 12474806-12475348 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T18D3.4.1 12468061 12475348 1

1 Sequence

Length
6334

1 Sequence Ontology Term

Identifier Name Description
transcript