WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F45E6.3.2 Sequence Name  F45E6.3.2
Length (nt)  2256   Chromosome Location  X: 12485049-12491751
Chromosome . Primary Identifier  X Chromosome Location . Start  12485049
Chromosome Location . End  12491751 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F45E6.3.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009726 tbc-13 F45E6.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F45E6.3 F45E6.3 1278   X: 12485054-12485347

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F45E6.3.2 12485049 12491751 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon255616   299   X: 12485049-12485347 Caenorhabditis elegans
Exon255619   231   X: 12487894-12488124 Caenorhabditis elegans
Exon255621   72   X: 12488373-12488444 Caenorhabditis elegans
Exon255623   162   X: 12488609-12488770 Caenorhabditis elegans
Exon255625   64   X: 12488944-12489007 Caenorhabditis elegans
Exon255627   92   X: 12489340-12489431 Caenorhabditis elegans
Exon255629   98   X: 12489559-12489656 Caenorhabditis elegans
Exon255631   97   X: 12489706-12489802 Caenorhabditis elegans
Exon255633   1141   X: 12490611-12491751 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F45E6.3.2 12485049 12491751 1

1 Sequence

Length
2256

1 Sequence Ontology Term

Identifier Name Description
transcript