WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H20J18.1h.1 Sequence Name  H20J18.1h.1
Length (nt)  3568   Chromosome Location  X: 12503893-12514055
Chromosome . Primary Identifier  X Chromosome Location . Start  12503893
Chromosome Location . End  12514055 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H20J18.1h.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004739 scd-1 H20J18.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H20J18.1h H20J18.1h 2736   X: 12504620-12504733

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:H20J18.1h.1 12503893 12514055 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon255650   841   X: 12503893-12504733 Caenorhabditis elegans
Exon255667   74   X: 12505015-12505088 Caenorhabditis elegans
Exon255679   166   X: 12505146-12505311 Caenorhabditis elegans
Exon255700   91   X: 12505819-12505909 Caenorhabditis elegans
Exon255713   263   X: 12506151-12506413 Caenorhabditis elegans
Exon255724   135   X: 12506643-12506777 Caenorhabditis elegans
Exon255736   134   X: 12506881-12507014 Caenorhabditis elegans
Exon255748   776   X: 12507071-12507846 Caenorhabditis elegans
Exon255760   923   X: 12507894-12508816 Caenorhabditis elegans
Exon255770   62   X: 12509158-12509219 Caenorhabditis elegans
Exon255780   103   X: 12513953-12514055 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:H20J18.1h.1 12503893 12514055 -1

1 Sequence

Length
3568

1 Sequence Ontology Term

Identifier Name Description
transcript