WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C16D6.2b.2 Sequence Name  C16D6.2b.2
Length (nt)  2026   Chromosome Location  X: 12536984-12551590
Chromosome . Primary Identifier  X Chromosome Location . Start  12536984
Chromosome Location . End  12551590 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C16D6.2b.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007635 npr-4 C16D6.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C16D6.2b C16D6.2b 1473   X: 12537468-12537684

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C16D6.2b.2 12536984 12551590 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon255788   701   X: 12536984-12537684 Caenorhabditis elegans
Exon255792   98   X: 12537993-12538090 Caenorhabditis elegans
Exon255798   174   X: 12539421-12539594 Caenorhabditis elegans
Exon255804   118   X: 12539687-12539804 Caenorhabditis elegans
Exon255810   359   X: 12539860-12540218 Caenorhabditis elegans
Exon255816   120   X: 12540270-12540389 Caenorhabditis elegans
Exon255822   154   X: 12540438-12540591 Caenorhabditis elegans
Exon255828   98   X: 12540641-12540738 Caenorhabditis elegans
Exon255835   70   X: 12540790-12540859 Caenorhabditis elegans
Exon255840   134   X: 12551457-12551590 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C16D6.2b.2 12536984 12551590 -1

1 Sequence

Length
2026

1 Sequence Ontology Term

Identifier Name Description
transcript