WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C16D6.2c.2 Sequence Name  C16D6.2c.2
Length (nt)  2004   Chromosome Location  X: 12536984-12551590
Chromosome . Primary Identifier  X Chromosome Location . Start  12536984
Chromosome Location . End  12551590 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C16D6.2c.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007635 npr-4 C16D6.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C16D6.2c C16D6.2c 1197   X: 12538030-12538090

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C16D6.2c.2 12536984 12551590 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon255789   701   X: 12536984-12537684 Caenorhabditis elegans
Exon255794   98   X: 12537993-12538090 Caenorhabditis elegans
Exon255800   152   X: 12539443-12539594 Caenorhabditis elegans
Exon255806   118   X: 12539687-12539804 Caenorhabditis elegans
Exon255812   359   X: 12539860-12540218 Caenorhabditis elegans
Exon255818   120   X: 12540270-12540389 Caenorhabditis elegans
Exon255824   154   X: 12540438-12540591 Caenorhabditis elegans
Exon255830   98   X: 12540641-12540738 Caenorhabditis elegans
Exon255837   70   X: 12540790-12540859 Caenorhabditis elegans
Exon255841   134   X: 12551457-12551590 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C16D6.2c.2 12536984 12551590 -1

1 Sequence

Length
2004

1 Sequence Ontology Term

Identifier Name Description
transcript