WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C16D6.2d Sequence Name  C16D6.2d
Length (nt)  1131   Chromosome Location  X: 12538030-12538090
Chromosome . Primary Identifier  X Chromosome Location . Start  12538030
Chromosome Location . End  12538090
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C16D6.2d

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE50035 NPR-4, isoform d 42.7 376 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00040729
WBRNAi00075424
WBRNAi00010863
WBRNAi00028971

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C16D6.2d 12538030 12538090 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007635 npr-4 C16D6.2 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:C16D6.2d 12538030 12538090 -1
CDS:C16D6.2d 12539443 12539594 -1
CDS:C16D6.2d 12539687 12539804 -1
CDS:C16D6.2d 12539860 12540218 -1
CDS:C16D6.2d 12540270 12540389 -1
CDS:C16D6.2d 12540438 12540591 -1
CDS:C16D6.2d 12540641 12540738 -1
CDS:C16D6.2d 12540790 12540858 -1

1 Sequence

Length
1131

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C16D6.2d.1 C16D6.2d.1 1131   X: 12538030-12540858