WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:R09A8.1a Sequence Name  R09A8.1a
Length (nt)  3180   Chromosome Location  X: 12613761-12613876
Chromosome . Primary Identifier  X Chromosome Location . Start  12613761
Chromosome Location . End  12613876
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R09A8.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE53061 R09A8.1, isoform a 120.2 1059 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00051582
WBRNAi00058559
WBRNAi00017619

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:R09A8.1a 12613761 12613876 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011152 R09A8.1 R09A8.1 Caenorhabditis elegans

13 Locations


Feature . Primary Identifier
Start End Strand
CDS:R09A8.1a 12613761 12613876 1
CDS:R09A8.1a 12613931 12614352 1
CDS:R09A8.1a 12614402 12614691 1
CDS:R09A8.1a 12614736 12614921 1
CDS:R09A8.1a 12614970 12615134 1
CDS:R09A8.1a 12615180 12615419 1
CDS:R09A8.1a 12615466 12615648 1
CDS:R09A8.1a 12615695 12615920 1
CDS:R09A8.1a 12616065 12616205 1
CDS:R09A8.1a 12616343 12616576 1
CDS:R09A8.1a 12616709 12616900 1
CDS:R09A8.1a 12617045 12617739 1
CDS:R09A8.1a 12617791 12617880 1

1 Sequence

Length
3180

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:R09A8.1a.1 R09A8.1a.1 3698   X: 12613751-12618388