WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H36L18.1.1 Sequence Name  H36L18.1.1
Length (nt)  1323   Chromosome Location  X: 12647117-12651487
Chromosome . Primary Identifier  X Chromosome Location . Start  12647117
Chromosome Location . End  12651487 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H36L18.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010423 zmp-5 H36L18.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H36L18.1 H36L18.1 1218   X: 12647252-12647308

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:H36L18.1.1 12647117 12651487 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon255956   72   X: 12647117-12647188 Caenorhabditis elegans
Exon255957   90   X: 12647219-12647308 Caenorhabditis elegans
Exon255958   49   X: 12647389-12647437 Caenorhabditis elegans
Exon255959   101   X: 12648290-12648390 Caenorhabditis elegans
Exon255961   124   X: 12648999-12649122 Caenorhabditis elegans
Exon255962   87   X: 12649179-12649265 Caenorhabditis elegans
Exon255963   135   X: 12649842-12649976 Caenorhabditis elegans
Exon255964   153   X: 12650021-12650173 Caenorhabditis elegans
Exon255965   131   X: 12650214-12650344 Caenorhabditis elegans
Exon255966   145   X: 12650885-12651029 Caenorhabditis elegans
Exon255967   80   X: 12651075-12651154 Caenorhabditis elegans
Exon255968   156   X: 12651332-12651487 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:H36L18.1.1 12647117 12651487 1

1 Sequence

Length
1323

1 Sequence Ontology Term

Identifier Name Description
transcript