WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T07C5.1d.1 Sequence Name  T07C5.1d.1
Length (nt)  1275   Chromosome Location  X: 12692308-12695559
Chromosome . Primary Identifier  X Chromosome Location . Start  12692308
Chromosome Location . End  12695559 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T07C5.1d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011564 ugt-50 T07C5.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T07C5.1d T07C5.1d 1275   X: 12692308-12692380

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T07C5.1d.1 12692308 12695559 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon256066   73   X: 12692308-12692380 Caenorhabditis elegans
Exon256070   100   X: 12692508-12692607 Caenorhabditis elegans
Exon256075   71   X: 12692666-12692736 Caenorhabditis elegans
Exon256080   146   X: 12692790-12692935 Caenorhabditis elegans
Exon256084   177   X: 12693852-12694028 Caenorhabditis elegans
Exon256087   160   X: 12694070-12694229 Caenorhabditis elegans
Exon256090   81   X: 12694285-12694365 Caenorhabditis elegans
Exon256093   149   X: 12694411-12694559 Caenorhabditis elegans
Exon256096   71   X: 12694617-12694687 Caenorhabditis elegans
Exon256098   247   X: 12695313-12695559 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T07C5.1d.1 12692308 12695559 1

1 Sequence

Length
1275

1 Sequence Ontology Term

Identifier Name Description
transcript