WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F16H9.2a.1 Sequence Name  F16H9.2a.1
Length (nt)  1131   Chromosome Location  X: 12705624-12808318
Chromosome . Primary Identifier  X Chromosome Location . Start  12705624
Chromosome Location . End  12808318 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F16H9.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008901 nhr-27 F16H9.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F16H9.2a F16H9.2a 1005   X: 12705624-12705880

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F16H9.2a.1 12705624 12808318 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon256123   257   X: 12705624-12705880 Caenorhabditis elegans
Exon256124   685   X: 12706296-12706980 Caenorhabditis elegans
Exon256127   86   X: 12707218-12707303 Caenorhabditis elegans
Exon256298   103   X: 12808216-12808318 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F16H9.2a.1 12705624 12808318 -1

1 Sequence

Length
1131

1 Sequence Ontology Term

Identifier Name Description
transcript