WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T08B2.11.1 Sequence Name  T08B2.11.1
Length (nt)  1533   Chromosome Location  I: 6221245-6223115
Chromosome . Primary Identifier  I Chromosome Location . Start  6221245
Chromosome Location . End  6223115 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T08B2.11.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020349 T08B2.11 T08B2.11 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T08B2.11 T08B2.11 1251   I: 6221285-6221365

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T08B2.11.1 6221245 6223115 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon15485   121   I: 6221245-6221365 Caenorhabditis elegans
Exon15486   194   I: 6221410-6221603 Caenorhabditis elegans
Exon15487   113   I: 6221651-6221763 Caenorhabditis elegans
Exon15488   308   I: 6221811-6222118 Caenorhabditis elegans
Exon15489   207   I: 6222174-6222380 Caenorhabditis elegans
Exon15490   90   I: 6222431-6222520 Caenorhabditis elegans
Exon15491   190   I: 6222570-6222759 Caenorhabditis elegans
Exon15492   310   I: 6222806-6223115 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T08B2.11.1 6221245 6223115 -1

1 Sequence

Length
1533

1 Sequence Ontology Term

Identifier Name Description
transcript