WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

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mRNA :

WormMine ID  Transcript:F16H9.1a.1 Sequence Name  F16H9.1a.1
Length (nt)  1601   Chromosome Location  X: 12721811-12728391
Chromosome . Primary Identifier  X Chromosome Location . Start  12721811
Chromosome Location . End  12728391 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F16H9.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004345 rgs-2 F16H9.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F16H9.1a F16H9.1a 510   X: 12722083-12722129

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F16H9.1a.1 12721811 12728391 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon256133   319   X: 12721811-12722129 Caenorhabditis elegans
Exon256138   45   X: 12725639-12725683 Caenorhabditis elegans
Exon256142   62   X: 12726524-12726585 Caenorhabditis elegans
Exon256146   119   X: 12726635-12726753 Caenorhabditis elegans
Exon256153   1056   X: 12727336-12728391 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F16H9.1a.1 12721811 12728391 1

1 Sequence

Length
1601

1 Sequence Ontology Term

Identifier Name Description
transcript