WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F16H9.1d.1 Sequence Name  F16H9.1d.1
Length (nt)  1807   Chromosome Location  X: 12725019-12728383
Chromosome . Primary Identifier  X Chromosome Location . Start  12725019
Chromosome Location . End  12728383 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F16H9.1d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004345 rgs-2 F16H9.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F16H9.1d F16H9.1d 504   X: 12725511-12725551

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F16H9.1d.1 12725019 12728383 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon256136   533   X: 12725019-12725551 Caenorhabditis elegans
Exon256141   45   X: 12725639-12725683 Caenorhabditis elegans
Exon256145   62   X: 12726524-12726585 Caenorhabditis elegans
Exon256149   119   X: 12726635-12726753 Caenorhabditis elegans
Exon256151   1048   X: 12727336-12728383 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F16H9.1d.1 12725019 12728383 1

1 Sequence

Length
1807

1 Sequence Ontology Term

Identifier Name Description
transcript