WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F22E10.5.1 Sequence Name  F22E10.5.1
Length (nt)  1473   Chromosome Location  X: 12762078-12765898
Chromosome . Primary Identifier  X Chromosome Location . Start  12762078
Chromosome Location . End  12765898 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F22E10.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009057 cept-1 F22E10.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F22E10.5 F22E10.5 1185   X: 12762085-12762138

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F22E10.5.1 12762078 12765898 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon256208   61   X: 12762078-12762138 Caenorhabditis elegans
Exon256209   98   X: 12762186-12762283 Caenorhabditis elegans
Exon256210   130   X: 12763269-12763398 Caenorhabditis elegans
Exon256211   148   X: 12763451-12763598 Caenorhabditis elegans
Exon256212   230   X: 12764172-12764401 Caenorhabditis elegans
Exon256213   126   X: 12764455-12764580 Caenorhabditis elegans
Exon256214   133   X: 12764633-12764765 Caenorhabditis elegans
Exon256215   152   X: 12765025-12765176 Caenorhabditis elegans
Exon256216   129   X: 12765459-12765587 Caenorhabditis elegans
Exon256217   266   X: 12765633-12765898 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F22E10.5.1 12762078 12765898 1

1 Sequence

Length
1473

1 Sequence Ontology Term

Identifier Name Description
transcript