WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T22H6.1.1 Sequence Name  T22H6.1.1
Length (nt)  1331   Chromosome Location  X: 12766818-12769797
Chromosome . Primary Identifier  X Chromosome Location . Start  12766818
Chromosome Location . End  12769797 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T22H6.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011937 ilc-17.1 T22H6.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T22H6.1 T22H6.1 666   X: 12767479-12767544

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T22H6.1.1 12766818 12769797 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon256218   727   X: 12766818-12767544 Caenorhabditis elegans
Exon256219   87   X: 12767593-12767679 Caenorhabditis elegans
Exon256220   102   X: 12767725-12767826 Caenorhabditis elegans
Exon256221   144   X: 12767879-12768022 Caenorhabditis elegans
Exon256222   184   X: 12768674-12768857 Caenorhabditis elegans
Exon256223   87   X: 12769711-12769797 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T22H6.1.1 12766818 12769797 -1

1 Sequence

Length
1331

1 Sequence Ontology Term

Identifier Name Description
transcript