WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T22H6.6a.1 Sequence Name  T22H6.6a.1
Length (nt)  5327   Chromosome Location  X: 12795201-12813639
Chromosome . Primary Identifier  X Chromosome Location . Start  12795201
Chromosome Location . End  12813639 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T22H6.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001560 gei-3 T22H6.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T22H6.6a T22H6.6a 4218   X: 12796310-12796416

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T22H6.6a.1 12795201 12813639 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

30 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon256260   1216   X: 12795201-12796416 Caenorhabditis elegans
Exon256262   135   X: 12796467-12796601 Caenorhabditis elegans
Exon256265   277   X: 12796650-12796926 Caenorhabditis elegans
Exon256268   61   X: 12797113-12797173 Caenorhabditis elegans
Exon256271   85   X: 12797224-12797308 Caenorhabditis elegans
Exon256274   211   X: 12797378-12797588 Caenorhabditis elegans
Exon256277   96   X: 12798511-12798606 Caenorhabditis elegans
Exon256279   135   X: 12798801-12798935 Caenorhabditis elegans
Exon256281   300   X: 12799130-12799429 Caenorhabditis elegans
Exon256283   297   X: 12799516-12799812 Caenorhabditis elegans
Exon256285   113   X: 12800012-12800124 Caenorhabditis elegans
Exon256287   46   X: 12800219-12800264 Caenorhabditis elegans
Exon256290   71   X: 12800513-12800583 Caenorhabditis elegans
Exon256291   114   X: 12802065-12802178 Caenorhabditis elegans
Exon256292   117   X: 12802477-12802593 Caenorhabditis elegans
Exon256293   292   X: 12802640-12802931 Caenorhabditis elegans
Exon256294   69   X: 12803494-12803562 Caenorhabditis elegans
Exon256295   155   X: 12804376-12804530 Caenorhabditis elegans
Exon256299   103   X: 12808216-12808318 Caenorhabditis elegans
Exon256300   105   X: 12809178-12809282 Caenorhabditis elegans
Exon256301   174   X: 12809329-12809502 Caenorhabditis elegans
Exon256302   163   X: 12810244-12810406 Caenorhabditis elegans
Exon256303   150   X: 12810649-12810798 Caenorhabditis elegans
Exon256304   110   X: 12811004-12811113 Caenorhabditis elegans
Exon256305   117   X: 12811183-12811299 Caenorhabditis elegans
Exon256306   93   X: 12811444-12811536 Caenorhabditis elegans
Exon256307   272   X: 12811583-12811854 Caenorhabditis elegans
Exon256308   102   X: 12811905-12812006 Caenorhabditis elegans
Exon256309   115   X: 12812457-12812571 Caenorhabditis elegans
Exon256310   33   X: 12813607-12813639 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T22H6.6a.1 12795201 12813639 -1

1 Sequence

Length
5327

1 Sequence Ontology Term

Identifier Name Description
transcript