WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T22H6.6b.1 Sequence Name  T22H6.6b.1
Length (nt)  1923   Chromosome Location  X: 12796310-12800572
Chromosome . Primary Identifier  X Chromosome Location . Start  12796310
Chromosome Location . End  12800572 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T22H6.6b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001560 gei-3 T22H6.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T22H6.6b T22H6.6b 1923   X: 12796310-12796416

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T22H6.6b.1 12796310 12800572 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon256261   107   X: 12796310-12796416 Caenorhabditis elegans
Exon256263   135   X: 12796467-12796601 Caenorhabditis elegans
Exon256266   277   X: 12796650-12796926 Caenorhabditis elegans
Exon256269   61   X: 12797113-12797173 Caenorhabditis elegans
Exon256272   85   X: 12797224-12797308 Caenorhabditis elegans
Exon256275   211   X: 12797378-12797588 Caenorhabditis elegans
Exon256278   96   X: 12798511-12798606 Caenorhabditis elegans
Exon256280   135   X: 12798801-12798935 Caenorhabditis elegans
Exon256282   300   X: 12799130-12799429 Caenorhabditis elegans
Exon256284   297   X: 12799516-12799812 Caenorhabditis elegans
Exon256286   113   X: 12800012-12800124 Caenorhabditis elegans
Exon256288   46   X: 12800219-12800264 Caenorhabditis elegans
Exon256289   60   X: 12800513-12800572 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T22H6.6b.1 12796310 12800572 -1

1 Sequence

Length
1923

1 Sequence Ontology Term

Identifier Name Description
transcript