WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F26B1.2b.2 Sequence Name  F26B1.2b.2
Length (nt)  1800   Chromosome Location  I: 6317699-6320364
Chromosome . Primary Identifier  I Chromosome Location . Start  6317699
Chromosome Location . End  6320364 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F26B1.2b.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017816 hrpk-1 F26B1.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F26B1.2b F26B1.2b 204   I: 6318047-6318114

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F26B1.2b.2 6317699 6320364 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon15730   66   I: 6317699-6317764 Caenorhabditis elegans
Exon15735   71   I: 6318044-6318114 Caenorhabditis elegans
Exon15744   115   I: 6318160-6318274 Caenorhabditis elegans
Exon15756   73   I: 6318592-6318664 Caenorhabditis elegans
Exon15762   609   I: 6318734-6319342 Caenorhabditis elegans
Exon15773   185   I: 6319451-6319635 Caenorhabditis elegans
Exon15783   681   I: 6319684-6320364 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F26B1.2b.2 6317699 6320364 1

1 Sequence

Length
1800

1 Sequence Ontology Term

Identifier Name Description
transcript