WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K02A4.2.2 Sequence Name  K02A4.2.2
Length (nt)  849   Chromosome Location  X: 12881109-12884989
Chromosome . Primary Identifier  X Chromosome Location . Start  12881109
Chromosome Location . End  12884989 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K02A4.2.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001681 gpc-1 K02A4.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K02A4.2 K02A4.2 189   X: 12881590-12881695

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K02A4.2.2 12881109 12884989 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon256408   587   X: 12881109-12881695 Caenorhabditis elegans
Exon256411   101   X: 12882329-12882429 Caenorhabditis elegans
Exon256413   97   X: 12884765-12884861 Caenorhabditis elegans
Exon256415   64   X: 12884926-12884989 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K02A4.2.2 12881109 12884989 -1

1 Sequence

Length
849

1 Sequence Ontology Term

Identifier Name Description
transcript