WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C05E7.4.1 Sequence Name  C05E7.4.1
Length (nt)  1327   Chromosome Location  X: 12965463-12968974
Chromosome . Primary Identifier  X Chromosome Location . Start  12965463
Chromosome Location . End  12968974 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C05E7.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007346 frpr-2 C05E7.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C05E7.4 C05E7.4 1062   X: 12965485-12965565

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C05E7.4.1 12965463 12968974 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon256467   103   X: 12965463-12965565 Caenorhabditis elegans
Exon256468   133   X: 12966082-12966214 Caenorhabditis elegans
Exon256469   122   X: 12966355-12966476 Caenorhabditis elegans
Exon256470   59   X: 12967329-12967387 Caenorhabditis elegans
Exon256471   106   X: 12967436-12967541 Caenorhabditis elegans
Exon256472   92   X: 12967589-12967680 Caenorhabditis elegans
Exon256473   128   X: 12967737-12967864 Caenorhabditis elegans
Exon256474   112   X: 12968341-12968452 Caenorhabditis elegans
Exon256475   472   X: 12968503-12968974 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C05E7.4.1 12965463 12968974 1

1 Sequence

Length
1327

1 Sequence Ontology Term

Identifier Name Description
transcript