WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F11C1.4.1 Sequence Name  F11C1.4.1
Length (nt)  2494   Chromosome Location  X: 12977074-12979929
Chromosome . Primary Identifier  X Chromosome Location . Start  12977074
Chromosome Location . End  12979929 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F11C1.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008693 F11C1.4 F11C1.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F11C1.4 F11C1.4 906   X: 12978505-12978760

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F11C1.4.1 12977074 12979929 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon256504   1687   X: 12977074-12978760 Caenorhabditis elegans
Exon256509   233   X: 12978892-12979124 Caenorhabditis elegans
Exon256510   108   X: 12979246-12979353 Caenorhabditis elegans
Exon256511   93   X: 12979403-12979495 Caenorhabditis elegans
Exon256512   373   X: 12979557-12979929 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F11C1.4.1 12977074 12979929 1

1 Sequence

Length
2494

1 Sequence Ontology Term

Identifier Name Description
transcript