WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F11C1.3.1 Sequence Name  F11C1.3.1
Length (nt)  1883   Chromosome Location  X: 12981775-12985868
Chromosome . Primary Identifier  X Chromosome Location . Start  12981775
Chromosome Location . End  12985868 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F11C1.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008692 scav-4 F11C1.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F11C1.3 F11C1.3 1683   X: 12981861-12981988

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F11C1.3.1 12981775 12985868 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon256513   214   X: 12981775-12981988 Caenorhabditis elegans
Exon256514   162   X: 12982676-12982837 Caenorhabditis elegans
Exon256515   76   X: 12983385-12983460 Caenorhabditis elegans
Exon256516   75   X: 12983505-12983579 Caenorhabditis elegans
Exon256517   95   X: 12983629-12983723 Caenorhabditis elegans
Exon256518   79   X: 12983774-12983852 Caenorhabditis elegans
Exon256519   128   X: 12983911-12984038 Caenorhabditis elegans
Exon256520   156   X: 12984087-12984242 Caenorhabditis elegans
Exon256521   130   X: 12984325-12984454 Caenorhabditis elegans
Exon256522   315   X: 12984903-12985217 Caenorhabditis elegans
Exon256523   74   X: 12985268-12985341 Caenorhabditis elegans
Exon256524   379   X: 12985490-12985868 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F11C1.3.1 12981775 12985868 1

1 Sequence

Length
1883

1 Sequence Ontology Term

Identifier Name Description
transcript